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Phylogeny and inference: from models to data and back

Feb 1 – 5, 2021
Institut Henri Poincaré
Europe/Paris timezone

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Contribution List

34 out of 34 displayed
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  1. 1. Samuel Alizon - ABC phylodynamics
    2/1/21, 2:00 PM
  2. 2. Rémi Monasson - Infer global, predict local: on the trade-off between statistical models and sequence data for protein fitness reconstruction
    2/1/21, 2:30 PM
  3. 3. Stéphane Guindon - Bayesian phylogeography along a continuum: sampling its way in a random walk
    2/1/21, 4:00 PM
  4. 4. Christophe Dessimoz - Laying foundations for very large scale comparative genomics
    2/1/21, 4:30 PM
  5. 5. Tandy Warnow - New methods for large-scale species tree estimation addressing GDL
    2/1/21, 5:00 PM
  6. 6. Katia Koelle - Tree-free phylodynamic inference for emerging viral pathogens and lineages
    2/1/21, 5:30 PM
  7. 7. Chikara Furusawa - Toward prediction and control of microbial evolution: Analysis of phenotypic constraints in laboratory evolution
    2/2/21, 9:00 AM
  8. 8. François Blanquart - Evolution of virulence in commensal bacteria: example of the High Pathogenicity Island in Escherichia coli
    2/2/21, 9:30 AM
  9. 9. Guillaume Achaz - What process(es) explain(s) genetic diversity within species?
    2/2/21, 10:00 AM
  10. 10. Alessandra Carbone - Inferring phylogeny and function from different sequence spaces
    2/2/21, 4:00 PM
  11. 11. Daniel Weissman - Evolution in spatially structured populations
    2/2/21, 4:30 PM
  12. 12. KC Huang - Bacterial evolution in complex environments
    2/2/21, 5:00 PM
  13. 13. Chris Illingworth - Sequencing error and phylogenetics
    2/2/21, 5:30 PM
  14. 14. Erik van Nimwegen - Recombination with complex population structure drives genome evolution in many bacterial species
    2/3/21, 1:30 PM
  15. 15. Olivier Rivoire - Models of coevolution in proteins: sampling, physics and evolution
    2/3/21, 2:00 PM
  16. 16. Clément Nizak - Parameters and determinants of responses to selection in antibody libraries
    2/3/21, 2:30 PM
  17. 17. Samir Suweis - Constrained proteome allocation, adaptive strategies, and coexistence in models of competitive microbial communities
    2/3/21, 4:00 PM
  18. 18. Simona Cocco - The heterogeneous landscape and early evolution of pathogen-associated CpG dinucleotides in SARS-CoV-2
    2/3/21, 4:30 PM
  19. 19. Ada Altieri - New perspectives on the emergence of multiple equilibria in large highly interacting ecosystems
    2/3/21, 5:00 PM
  20. 20. Rosalind Allen - Modelling phenotypic delay in the evolution of bacterial antibiotic resistance
    2/3/21, 5:30 PM
  21. 21. Amaury Lambert - The genomic view of diversification
    2/4/21, 1:30 PM
  22. 22. Eduardo Rocha - Gene flow, innovation and the invention of microbial functions
    2/4/21, 2:00 PM
  23. 23. Benny Chain - Capturing T cell receptor similarities
    2/4/21, 2:30 PM
  24. 24. Martin Weigt - Wandering through sequence space
    2/4/21, 4:00 PM
  25. 25. Michael Desai - Evolution as a stochastic algorithm
    2/4/21, 4:30 PM
  26. 26. Alison Feder - Inferring spatially-embedded genealogies in expanding populations
    2/4/21, 5:00 PM
  27. 27. Daniel Weinreich - A high-throughput approach to study epistasis in proteins
    2/4/21, 5:30 PM
  28. 28. Joachim Krug - Evolutionary pathways to antibiotic resistance
    2/5/21, 1:30 PM
  29. 29. Matteo Smerlak - The retrospective view of molecular evolution
    2/5/21, 2:00 PM
  30. 30. Namiko Mitarai - Bacteria and Phage: Competition and Coexistence
    2/5/21, 2:30 PM
  31. 31. Thierry Mora - Solitary waves in virus-host co-evolution
    2/5/21, 4:00 PM
  32. 32. Marta Luksza - Cancer evolution and metastasis under immune selection
    2/5/21, 4:30 PM
  33. 33. Sarah Cobey - Vaccination and adaptive evolution of SARS-CoV-2
    2/5/21, 5:00 PM
  34. 34. Pedagogical tutorial by Martin Weigt: "1) aligning two sequences"; "2) sequence profiles and hidden Markov models"