Ecology and co-evolution: from models to data and back

Jan 11, 2021, 9:00 AM → Jan 15, 2021, 7:00 PM Europe/Paris

Amphithéâtre Hermite (Institut Henri Poincaré)

Click here for the program

Organizers:
Anne-Florence Bitbol (EPFL)
Claude Loverdo (CNRS & Sorbonne Université)
Mikhail Tikhonov (Washington University St Louis)
Aleksandra Walczak (CNRS & ENS)

Monday, January 11

1:00 PM → 7:00 PM Afternoon

1:00 PM Introduction

Recording

1:30 PM Michael Manhart - Tracking lineage diversity at high resolution in adapting bacterial populations

Recording

2:00 PM Claudia Bank - Drug-induced mutational meltdown and its circumvention in theory and experiments

2:30 PM Jessica Metcalf - The evolution of within-host ecologies: models to data and back

Recording

3:00 PM Social

3:30 PM Break

4:00 PM Richard Neher - Population genetics of rapid adaptation and influenza virus evolution

Recording

4:30 PM Florence Débarre - Can a gene drive spreading over space be stopped?

Recording

5:00 PM Michael Laessig - Intra-host evolution of SARS-Cov-2

5:30 PM John Barton - Insights into viral evolution from temporal genetic data

Recording

6:00 PM Social

Tuesday, January 12

1:30 PM → 6:30 PM Afternoon

1:30 PM Posters

3:30 PM Break

4:00 PM Ned Wingreen - Is cross-feeding evolutionarily stable?

Ned Wingreen

4:30 PM Tami Lieberman - Priority effects in the human skin microbiome revealed by tracking within-person evolution

5:00 PM Luis-Miguel Chevin - Demographic and evolutionary responses to stochastic environments

Chevin

5:30 PM Benjamin Good - Eco-evolutionary feedbacks in the human gut microbiome

Recording

6:00 PM Social

8:30 PM → 10:30 PM Evening

8:30 PM Ivana Cvijovic - Evolution at high resolution

9:00 PM Oskar Hallatschek - Beyond panmixia: Scale-sensitive tradeoff between stability and adaptation

9:30 PM Edo Kussell - Ecological memory preserves phage resistance mechanisms in bacteria

10:00 PM Social

Wednesday, January 13

1:30 PM → 6:30 PM Afternoon

1:30 PM Guillaume Martin - Emergence of a simple fitness landscape from integrated phenotypic networks: can we (re)concile long term fitness trajectories and mutant fitness data

Recording

2:00 PM Maud Tenaillon - Adaptive introgression from maize has facilitated the establishment of teosinte as a noxious weed in Europe

Recording

2:30 PM Guy Bunin - Interaction patterns in high-dimensional ecological communities

Recording

3:00 PM Social

3:30 PM Break

4:00 PM Andrea Graham - Dissecting causes of variation in immune defense in silico, in vitro, & in vivo

Recording

4:30 PM Sylvain Gandon - Coevolution and competition drive the diversification of CRISPR immunity

Recording

5:00 PM Mercedes Pascual - Eco-evolutionary dynamics, hyper-diversity and frequency-dependent selection in a host-parasite system

Recording

5:30 PM Armita Nourmohammad - Control of molecular evolution

Recording -

6:00 PM Social

Thursday, January 14

1:30 PM → 6:30 PM Afternoon

1:30 PM Matthieu Barbier - Disorder in ecological interactions - from data to models

Recording

2:00 PM Fernanda Pinheiro - Metabolic fitness landscapes predict the evolution of antibiotic resistance

Recording

2:30 PM Diana Fusco - The inevitable density-dependent dispersal of viral populations and the emergence of pushed waves

Recording part 1

Recording part 2

3:00 PM Social

3:30 PM Break

4:00 PM Jeff Gore - Building microbial communities from the bottom up

Recording

4:30 PM Karoline Faust - Emergent behaviour in a three-species human gut community

Recording

5:00 PM Seppe Kuehn - A sparse mapping from structure to function in microbial communities

Recording

5:30 PM Shenshen Wang - On the role of cross-reactivity in virus-host coevolution

6:00 PM Social

Friday, January 15

1:30 PM → 6:30 PM Afternoon

1:30 PM Roland Regoes - Insights into the evolution of HIV-1 from a three-year-long passaging experiment

Recording

2:00 PM François Munoz - An eco-evolutionary model integrating long-term demograhic dynamics under changing environment

Recording

2:30 PM Lindi Wahl - Change for the better: shifts in mutational biases enhance access to beneficial mutations in E. coli

Recording

3:00 PM Social

3:30 PM Break

4:00 PM Eugene Shakhnovich - Understanding evolution on multiple scales: from protein physics to population genetics

Recording

4:30 PM Faruck Morcos - Inferred epistasis enhances neutral models of sequence evolution

Recording

5:00 PM Arvind Murugan - Physical constraints on epistasis

Recording

5:30 PM Daniel Fisher - Ecological chaos and evolution of intra-species diversity

Recording

6:00 PM Social