21–22 juin 2018
Paris
Fuseau horaire Europe/Paris

C-mix: a high dimensional mixture model for censored durations, with applications to genetic data

22 juin 2018, 10:00
30m
Amphi Risler (jeudi), Amphi Tisserand (vendredi) (Paris)

Amphi Risler (jeudi), Amphi Tisserand (vendredi)

Paris

AgroParisTech 16 rue Claude Bernard F-75231 Paris Cedex 05

Orateur

Prof. Agathe Guilloux (Université d'Évry Val d'Essonne)

Description

We introduce a supervised learning mixture model for censored durations (C-mix) to simultaneously detect subgroups of patients with different prognosis and order them based on their risk. Our method is applicable in a high-dimensional setting where datasets contain a large number of biomedical covariates. To address this difficulty, we penalize the negative log-likelihood by the Elastic-Net, which leads to a sparse parameterization of the model and automatically pinpoints the relevant covariates for the survival prediction. Inference is achieved using an efficient Quasi-Newton Expectation Maximization (QNEM) algorithm. The statistical performance of the method is illustrated on three publicly available genetic cancer datasets with high-dimensional covariates.

Auteur principal

Prof. Agathe Guilloux (Université d'Évry Val d'Essonne)

Documents de présentation

Aucun document.